Jackson_Lab_Ciciotte_MURGIGV01_20200903_FinalReport
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| ID (Secondary IDs) | Haplotype Candidate | Strain Name | Strain ID | Sex | Platform | % Het. Calls | % Hom. Calls | % No Call | % Concordance |
|---|---|---|---|---|---|---|---|---|---|
| ADG (1) | False | CC029 | 26972 | male | GigaMUGA | 0.78% | 95.11% | 4.10% | 94.96% |
| ADH (2) | False | CC029 | 26972 | male | GigaMUGA | 0.81% | 95.23% | 3.97% | 94.77% |
| ADJ (3) | False | CC029 | 26972 | male | GigaMUGA | 1.36% | 93.24% | 5.40% | 94.15% |
| ADK (4) | False | CC029 | 26972 | female | GigaMUGA | 0.83% | 95.29% | 3.88% | 94.80% |
| ADM (5) | False | CC029 | 26972 | male | GigaMUGA | 0.75% | 95.33% | 3.92% | 94.79% |
| ADN (6) | False | CC029 | 26972 | male | GigaMUGA | 3.88% | 87.45% | 8.67% | 91.48% |
| ADP (7) | False | CC083 | 31921 | female | GigaMUGA | 0.74% | 95.14% | 4.11% | 94.76% |
| ADQ (8) | False | CC083 | 31921 | female | GigaMUGA | 0.71% | 95.28% | 4.01% | 94.72% |
| ADR (9) | False | CC083 | 31921 | male | GigaMUGA | 0.91% | 94.81% | 4.27% | 94.70% |
| ADS (10) | False | CC083 | 31921 | male | GigaMUGA | 0.91% | 95.07% | 4.02% | 94.72% |
| ADT (11) | False | CC083 | 31921 | male | GigaMUGA | 0.78% | 95.20% | 4.02% | 94.73% |
| ADU (12) | False | CC083 | 31921 | male | GigaMUGA | 0.71% | 95.06% | 4.23% | 94.75% |
| ADV (1a) | False | CC007 | 29625 | male | GigaMUGA | 0.88% | 94.99% | 4.13% | 94.76% |
| ADW (2a) | False | CC007 | 29625 | male | GigaMUGA | 1.71% | 93.81% | 4.48% | 94.61% |
| ADX (3a) | False | CC007 | 29625 | male | GigaMUGA | 1.57% | 93.46% | 4.97% | 94.61% |
| ADY (4a) | False | CC007 | 29625 | male | GigaMUGA | 0.92% | 94.73% | 4.35% | 94.88% |
| ADZ (5a) | False | CC007 | 29625 | male | GigaMUGA | 1.53% | 93.65% | 4.82% | 94.58% |
| AE2 (6a) | False | CC007 | 29625 | male | GigaMUGA | 1.26% | 94.54% | 4.20% | 94.72% |
| AE3 (7a) | False | CC030 | 25426 | male | GigaMUGA | 4.98% | 90.99% | 4.03% | 94.59% |
| AE4 (8a) | False | CC030 | 25426 | male | GigaMUGA | 8.25% | 81.48% | 10.27% | 90.48% |
| AE5 (9a) | False | CC030 | 25426 | male | GigaMUGA | 2.96% | 92.92% | 4.12% | 94.63% |
| AE6 (10a) | False | CC030 | 25426 | male | GigaMUGA | 3.81% | 92.08% | 4.11% | 94.62% |
| AE7 (11a) | False | CC030 | 25426 | male | GigaMUGA | 2.60% | 93.38% | 4.02% | 94.66% |
| AE8 (12a) | False | CC030 | 25426 | male | GigaMUGA | 4.30% | 91.11% | 4.60% | 94.50% |
| AE9 (13) | False | CC031 | 30098 | male | GigaMUGA | 0.98% | 95.19% | 3.83% | 94.74% |
| AEA (14) | False | CC031 | 30098 | male | GigaMUGA | 3.40% | 88.67% | 7.93% | 92.12% |
| AEB (15) | False | CC031 | 30098 | male | GigaMUGA | 1.01% | 95.07% | 3.92% | 94.76% |
| AEC (16) | False | CC031 | 30098 | female | GigaMUGA | 0.77% | 95.31% | 3.92% | 94.80% |
| AED (17) | False | CC031 | 30098 | male | GigaMUGA | 1.03% | 94.28% | 4.69% | 94.64% |
| AEE (18) | False | CC031 | 30098 | male | GigaMUGA | 0.75% | 95.44% | 3.81% | 94.73% |
| AEF (19) | False | CC022 | 25424 | male | GigaMUGA | 1.10% | 94.87% | 4.02% | 94.78% |
| AEG (20) | False | CC022 | 25424 | male | GigaMUGA | 1.12% | 94.85% | 4.03% | 94.78% |
| AEH (21) | False | CC022 | 25424 | male | GigaMUGA | 0.76% | 95.20% | 4.04% | 94.80% |
| AEJ (22) | False | CC022 | 25424 | male | GigaMUGA | 0.89% | 95.07% | 4.04% | 94.80% |
| AEK (23) | False | CC022 | 25424 | male | GigaMUGA | 0.75% | 95.20% | 4.05% | 94.80% |
| AEM (24) | False | CC022 | 25424 | male | GigaMUGA | 0.83% | 95.12% | 4.05% | 94.81% |
| AEN (25) | False | CC033 | 25910 | male | GigaMUGA | 0.70% | 95.40% | 3.90% | 94.76% |
| AEP (26) | False | CC033 | 25910 | male | GigaMUGA | 1.10% | 95.02% | 3.88% | 94.72% |
| AEQ (27) | False | CC033 | 25910 | male | GigaMUGA | 0.96% | 94.95% | 4.08% | 94.72% |
| AER (28) | False | CC033 | 25910 | male | GigaMUGA | 1.08% | 94.98% | 3.94% | 94.78% |
| AES (29) | False | CC033 | 25910 | female | GigaMUGA | 1.07% | 94.97% | 3.96% | 94.78% |
| AET (30) | False | CC033 | 25910 | male | GigaMUGA | 0.78% | 95.17% | 4.05% | 94.86% |
| AEU (31) | False | CC045 | 25425 | male | GigaMUGA | 1.20% | 94.83% | 3.96% | 94.73% |
| AEV (32) | False | CC045 | 25425 | female | GigaMUGA | 1.10% | 94.79% | 4.10% | 94.74% |
| AEW (33) | False | CC045 | 25425 | male | GigaMUGA | 1.09% | 94.94% | 3.98% | 94.74% |
| AEX (34) | False | CC045 | 25425 | female | GigaMUGA | 1.86% | 94.07% | 4.06% | 94.72% |
| AEY (35) | False | CC045 | 25425 | female | GigaMUGA | 1.97% | 93.18% | 4.85% | 94.58% |
| AEZ (36) | False | CC045 | 25425 | female | GigaMUGA | 2.20% | 93.72% | 4.08% | 94.71% |
| AF2 (37) | False | CC036 | 25127 | male | GigaMUGA | 1.60% | 93.36% | 5.03% | 94.38% |
| AF3 (38) | False | CC036 | 25127 | male | GigaMUGA | 1.39% | 94.49% | 4.12% | 94.80% |
| AF4 (39) | False | CC036 | 25127 | female | GigaMUGA | 0.92% | 95.20% | 3.89% | 94.76% |
| AF5 (40) | False | CC036 | 25127 | male | GigaMUGA | 1.25% | 94.75% | 4.00% | 94.74% |
| AF6 (41) | False | CC036 | 25127 | male | GigaMUGA | 1.35% | 94.79% | 3.86% | 94.69% |
| AF7 (42) | False | CC036 | 25127 | female | GigaMUGA | 1.23% | 94.89% | 3.88% | 94.76% |
| AF8 (43) | False | CC081 | 32683 | female | GigaMUGA | 16.43% | 79.49% | 4.08% | 84.42% |
| AF9 (44) | False | CC081 | 32683 | female | GigaMUGA | 31.14% | 64.64% | 4.23% | 81.34% |
| AFA (45) | False | CC081 | 32683 | male | GigaMUGA | 16.03% | 79.67% | 4.30% | 85.32% |
| AFB (46) | False | CC081 | 32683 | female | GigaMUGA | 18.53% | 77.09% | 4.39% | 84.40% |
| AFC (47) | False | CC081 | 32683 | female | GigaMUGA | 20.34% | 66.36% | 13.31% | 81.63% |
| AFD (48) | False | CC081 | 32683 | male | GigaMUGA | 15.11% | 80.61% | 4.28% | 85.21% |
| AFE (49) | False | CC020 | 25129 | female | GigaMUGA | 1.04% | 95.06% | 3.90% | 94.75% |
| AFF (50) | False | CC020 | 25129 | female | GigaMUGA | 1.32% | 94.79% | 3.89% | 94.77% |
| AFG (51) | False | CC020 | 25129 | female | GigaMUGA | 1.27% | 94.82% | 3.90% | 94.79% |
| AFH (52) | False | CC020 | 25129 | female | GigaMUGA | 1.18% | 94.94% | 3.88% | 94.76% |
| AFJ (53) | False | CC020 | 25129 | male | GigaMUGA | 0.73% | 95.32% | 3.94% | 94.76% |
| AFK (54) | False | CC020 | 25129 | male | GigaMUGA | 1.05% | 95.03% | 3.92% | 94.76% |