Sample: E67

Sample ID * E67 (DO_iPSC_1746)
Owner Laura Reinholdt
Strain Name(s)
Strain ID 009376
Sex unknown
Platform GigaMUGA
% Het. Calls 30.07%
% Hom. Calls 64.77%
% No Calls 5.16%
% Concordance N/A
Haplotype Candidate False
Notes: From a female mouse, but X is mostly homozygous? Is this XO? Are there Y calls? 47 A-10285-19 X-5260-20 Jackson_Lab_Korstanje OConnor Jackson_Lab_Korstanje_MURGIGV01_20201111 X-5260-20 Jackson_Lab_Korstanje_MURGIGV01_20201111_X-5260-20_G9 Female F 35 11/11/20 285616 G9 X-5260-20 TRUE 0.934126303 yes X-3331-20 2 1746 A 91.31 NA NA 1/25/22 NA NA NA NA P2 NA NA

Genome Karyotype Plot

Click any area of the karyotype plot to get a zoomed in view.

You can modify the "Contributing Haplotype Strains" below and click "Save Edits". This will cause the haplotype structure of this strain to be inferred based on these settings (using a hidden markov model) and rendered in a plot below.

Contributing Haplotype Strains:
Download SNP Level Haplotype Report Download Haplotype Composition Summary Export Haplotype Plot to .PNG image

Genome Interval Plot



Go to Ensembl Browser Go to UCSC Browser