Sample: 6VM (DO_G31_51)

Sample ID 6VM (DO_G31_51)
Owner laura.reinholdt@jax.org
Strain Name(s)
Strain ID 9376
Sex Unknown
Platform GigaMUGA
% Het. Calls 30.16%
% Hom. Calls 66.00%
% No Calls 3.83%
% Concordance N/A
Haplotype Candidate False
Notes:


Genome Karyotype Plot

Click any area of the karyotype plot to get a zoomed in view.

You can modify the "Contributing Haplotype Strains" below and click "Save Edits". This will cause the haplotype structure of this strain to be inferred based on these settings (using a hidden markov model) and rendered in a plot below.

Contributing Haplotype Strains:
129S1/SvImJ, A/J, C57BL/6J, CAST/EiJ, NOD/ShiLtJ, NZO/HlLtJ, PWK/PhJ, WSB/EiJ
0 Mb20 Mb40 Mb60 Mb80 Mb100 Mb120 Mb140 Mb160 Mb180 MbChr1Chr2Chr3Chr4Chr5Chr6Chr7Chr8Chr9Chr10Chr11Chr12Chr13Chr14Chr15Chr16Chr17Chr18Chr19ChrXChrYChrM129S1/SvImJA/JC57BL/6JCAST/EiJNOD/ShiLtJNZO/HlLtJPWK/PhJWSB/EiJ
Download SNP Level Haplotype Report Download Haplotype Composition Summary Export Haplotype Plot to .PNG image

Genome Interval Plot

129S1/SvImJ, A/J, C57BL/6J, CAST/EiJ, NOD/ShiLtJ, NZO/HlLtJ, PWK/PhJ, WSB/EiJ
0 Mb1 Mb2 Mb3 Mb4 Mb5 Mb6 Mb7 Mb8 Mb9 Mb10 MbChr1129S1/SvImJA/JC57BL/6JCAST/EiJNOD/ShiLtJNZO/HlLtJPWK/PhJWSB/EiJ


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Generating Genome Karyotype Plot